Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yafy family protein | Verru16B_RS02000 | Not Available | Negative | 457077 - 458027 | 35717.2 |
| duf2238 domain-containing protein | Verru16B_RS02005 | Not Available | Positive | 458118 - 458909 | 29735.1 |
| abc transporter atp-binding protein | Verru16B_RS02010 | Not Available | Positive | 459020 - 459772 | 26847.4 |
| abc transporter permease | Verru16B_RS02015 | Not Available | Positive | 459865 - 462231 | 85359.0 |
| efflux rnd transporter periplasmic adaptor subunit | Verru16B_RS02020 | Not Available | Positive | 462348 - 463520 | 41596.0 |
| m2 family metallopeptidase | Verru16B_RS02025 | Not Available | Positive | 463866 - 465662 | 67418.6 |
| chase domain-containing protein | Verru16B_RS02030 | Not Available | Negative | 465785 - 468784 | 109240.0 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | Verru16B_RS02035 | Not Available | Positive | 469155 - 471014 | 66224.6 |
| thiamine pyrophosphate-dependent enzyme | Verru16B_RS02040 | Not Available | Positive | 471063 - 472019 | 34798.6 |
| hypothetical protein | Verru16B_RS02045 | Not Available | Negative | 472314 - 472553 | 8742.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
