Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | Verru16B_RS18520 | Not Available | Negative | 440665 - 442641 | 68488.2 |
| response regulator | Verru16B_RS01955 | Not Available | Negative | 442942 - 443685 | 27577.2 |
| pas domain s-box protein | Verru16B_RS01960 | Not Available | Negative | 443687 - 446443 | 101646.0 |
| tonb family protein | Verru16B_RS01965 | Not Available | Negative | 446872 - 447588 | 25613.9 |
| bile acid:sodium symporter family protein | Verru16B_RS01970 | Not Available | Positive | 447886 - 448812 | 32748.0 |
| duf2126 domain-containing protein | Verru16B_RS01975 | Not Available | Positive | 449093 - 452503 | 127084.0 |
| circularly permuted type 2 atp-grasp protein | Verru16B_RS01980 | Not Available | Positive | 452620 - 455082 | 91629.6 |
| transglutaminase family protein | Verru16B_RS01985 | Not Available | Positive | 455116 - 455994 | 32200.9 |
| hypothetical protein | Verru16B_RS01990 | Not Available | Negative | 456093 - 456500 | 14826.8 |
| voc family protein | Verru16B_RS01995 | Not Available | Negative | 456513 - 456884 | 13276.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
