Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | Verru16B_RS00155 | Not Available | Negative | 29949 - 31070 | 41428.4 |
| hypothetical protein | Verru16B_RS00160 | Not Available | Positive | 31177 - 32190 | 37484.6 |
| fecr domain-containing protein | Verru16B_RS00165 | Not Available | Negative | 32482 - 33666 | 37652.9 |
| chase2 domain-containing protein | Verru16B_RS00170 | Not Available | Negative | 33817 - 36060 | 82556.7 |
| hypothetical protein | Verru16B_RS00175 | Not Available | Negative | 36191 - 36859 | 24577.4 |
| hypothetical protein | Verru16B_RS00180 | Not Available | Negative | 37086 - 37823 | 25962.8 |
| rna polymerase sigma factor | Verru16B_RS00185 | Not Available | Negative | 37820 - 38371 | 20571.7 |
| nitrogen regulation protein nr(ii) | Verru16B_RS00190 | Not Available | Negative | 38425 - 39582 | 42356.6 |
| ribonuclease hii | Verru16B_RS00195 | Not Available | Negative | 39618 - 40376 | 27630.2 |
| hypothetical protein | Verru16B_RS00200 | Not Available | Positive | 40564 - 41043 | 19450.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
