Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | Verru16B_RS01900 | Not Available | Negative | 433376 - 433897 | 19882.8 |
| hypothetical protein | Verru16B_RS01905 | Not Available | Negative | 433952 - 434329 | 14055.3 |
| helix-turn-helix transcriptional regulator | Verru16B_RS01910 | Not Available | Negative | 434359 - 434553 | 7365.92 |
| hypothetical protein | Verru16B_RS01915 | Not Available | Negative | 434560 - 434985 | 15870.7 |
| sgnh/gdsl hydrolase family protein | Verru16B_RS01920 | Not Available | Negative | 435109 - 436104 | 35680.1 |
| chemotaxis protein chex | Verru16B_RS01925 | Not Available | Positive | 436289 - 436798 | 17962.8 |
| atp-binding cassette domain-containing protein | Verru16B_RS01930 | Not Available | Negative | 437064 - 438878 | 67226.6 |
| response regulator | Verru16B_RS01935 | Not Available | Negative | 439242 - 439685 | 15990.6 |
| voc family protein | Verru16B_RS01940 | Not Available | Positive | 439793 - 440284 | 17403.8 |
| response regulator | Verru16B_RS01945 | Not Available | Negative | 440238 - 440678 | 15762.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
