Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | Verru16B_RS01800 | Not Available | Negative | 413182 - 414597 | 49129.6 |
| plastocyanin/azurin family copper-binding protein | Verru16B_RS01805 | Not Available | Negative | 414822 - 415313 | 17275.0 |
| hypothetical protein | Verru16B_RS01810 | Not Available | Negative | 415359 - 415790 | 16327.7 |
| sco family protein | Verru16B_RS01815 | Not Available | Negative | 415800 - 416522 | 25667.9 |
| formylglycine-generating enzyme family protein | Verru16B_RS01820 | Not Available | Negative | 416519 - 417313 | 28130.1 |
| copper-containing nitrite reductase | Verru16B_RS01825 | Not Available | Negative | 417440 - 418939 | 53271.9 |
| ywic-like family protein | Verru16B_RS01830 | Not Available | Negative | 419024 - 419851 | 27836.4 |
| hypothetical protein | Verru16B_RS01835 | Not Available | Positive | 420078 - 420314 | 8756.98 |
| twin-arginine translocase subunit tatc | Verru16B_RS01840 | Not Available | Negative | 420494 - 421294 | 29479.1 |
| pyruvate, phosphate dikinase | Verru16B_RS01845 | Not Available | Positive | 421470 - 424253 | 100832.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
