Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | Verru16B_RS17650 | Not Available | Positive | 4190017 - 4190850 | 29041.3 |
| ynce family protein | Verru16B_RS17655 | Not Available | Positive | 4190852 - 4191604 | 27537.1 |
| 4a-hydroxytetrahydrobiopterin dehydratase | Verru16B_RS17660 | Not Available | Negative | 4191605 - 4191898 | 10874.0 |
| polyprenyl diphosphate synthase | Verru16B_RS17665 | Not Available | Positive | 4192069 - 4192827 | 28165.5 |
| phosphatidate cytidylyltransferase | Verru16B_RS17670 | Not Available | Positive | 4192899 - 4193741 | 30012.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | Verru16B_RS17675 | Not Available | Positive | 4193921 - 4195102 | 41529.4 |
| rip metalloprotease rsep | Verru16B_RS17680 | Not Available | Positive | 4195125 - 4196552 | 51573.0 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | Verru16B_RS17685 | Not Available | Positive | 4196692 - 4198728 | 72492.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
