Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | Verru16B_RS17550 | Not Available | Positive | 4164717 - 4165253 | 19642.2 |
| hypothetical protein | Verru16B_RS17555 | Not Available | Positive | 4165235 - 4165615 | 13176.0 |
| thymidine phosphorylase | Verru16B_RS17560 | Not Available | Negative | 4165782 - 4167128 | 49141.2 |
| arginine--trna ligase | Verru16B_RS17565 | Not Available | Positive | 4167335 - 4169086 | 64081.3 |
| gyf domain-containing protein | Verru16B_RS17570 | Not Available | Positive | 4169239 - 4170009 | 27329.5 |
| yihy/virulence factor brkb family protein | Verru16B_RS17575 | Not Available | Positive | 4170031 - 4171533 | 55417.8 |
| pqq-dependent sugar dehydrogenase | Verru16B_RS17580 | Not Available | Positive | 4171615 - 4173225 | 58406.5 |
| rod shape-determining protein | Verru16B_RS17585 | Not Available | Positive | 4173333 - 4174358 | 36393.2 |
| hypothetical protein | Verru16B_RS17590 | Not Available | Positive | 4174366 - 4174635 | 10123.3 |
| rod shape-determining protein mrec | Verru16B_RS17595 | Not Available | Positive | 4174660 - 4175490 | 30243.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
