Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS17500 | Not Available | Positive | 4156128 - 4157012 | 31660.6 |
| methyltransferase domain-containing protein | Verru16B_RS17505 | Not Available | Positive | 4157105 - 4157908 | 28909.2 |
| tetratricopeptide repeat protein | Verru16B_RS17510 | Not Available | Positive | 4157974 - 4159875 | 68512.1 |
| membrane or secreted protein | Verru16B_RS17515 | Not Available | Negative | 4159885 - 4160616 | 26864.6 |
| glycoside hydrolase family 43 protein | Verru16B_RS17520 | Not Available | Negative | 4160687 - 4161763 | 40191.5 |
| hypothetical protein | Verru16B_RS17525 | Not Available | Negative | 4161834 - 4162268 | 16081.8 |
| class i sam-dependent rrna methyltransferase | Verru16B_RS17530 | Not Available | Negative | 4162320 - 4163591 | 47449.1 |
| pldc n-terminal domain-containing protein | Verru16B_RS17535 | Not Available | Negative | 4163715 - 4163888 | 6482.41 |
| hypothetical protein | Verru16B_RS17540 | Not Available | Positive | 4164059 - 4164259 | 6763.42 |
| duf6249 domain-containing protein | Verru16B_RS17545 | Not Available | Positive | 4164292 - 4164720 | 15675.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
