Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | Verru16B_RS17350 | Not Available | Negative | 4124628 - 4125896 | 44180.6 |
| hypothetical protein | Verru16B_RS17355 | Not Available | Negative | 4125970 - 4126152 | 6776.34 |
| hypothetical protein | Verru16B_RS19080 | Not Available | Negative | 4126200 - 4126331 | 4825.15 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | Verru16B_RS17360 | Not Available | Negative | 4126350 - 4127465 | 41162.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | Verru16B_RS17370 | Not Available | Negative | 4127844 - 4129244 | 49870.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | Verru16B_RS17375 | Not Available | Negative | 4129255 - 4130847 | 58136.8 |
| penicillin-binding protein 2 | Verru16B_RS17380 | Not Available | Negative | 4130844 - 4132697 | 67411.0 |
| hypothetical protein | Verru16B_RS17385 | Not Available | Negative | 4132708 - 4133124 | 15197.6 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | Verru16B_RS17390 | Not Available | Negative | 4133131 - 4134081 | 34487.3 |
| hypothetical protein | Verru16B_RS18480 | Not Available | Negative | 4134062 - 4134205 | 5467.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
