Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | Verru16B_RS17200 | Not Available | Negative | 4093817 - 4096255 | 92363.8 |
| replicative dna helicase | Verru16B_RS17205 | Not Available | Negative | 4096236 - 4097657 | 51976.7 |
| 50s ribosomal protein l9 | Verru16B_RS17210 | Not Available | Negative | 4097847 - 4098326 | 16840.5 |
| single-stranded dna-binding protein | Verru16B_RS17215 | Not Available | Negative | 4098378 - 4098845 | 16943.0 |
| 30s ribosomal protein s6 | Verru16B_RS17220 | Not Available | Negative | 4098876 - 4099172 | 10939.0 |
| aminoacyl-trna hydrolase | Verru16B_RS17225 | Not Available | Negative | 4099153 - 4099752 | 21532.8 |
| 50s ribosomal protein l25 | Verru16B_RS17230 | Not Available | Negative | 4099812 - 4100573 | 25928.4 |
| Trna-asn | Not Available | Not Available | Positive | 4100761 - 4100835 | Not Available |
| cpbp family intramembrane glutamic endopeptidase | Verru16B_RS17240 | Not Available | Negative | 4100941 - 4101696 | 27524.3 |
| sodium:solute symporter family protein | Verru16B_RS17245 | Not Available | Positive | 4101976 - 4103733 | 63061.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
