Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-5-semialdehyde dehydrogenase | Verru16B_RS17100 | Not Available | Positive | 4065025 - 4066308 | 44554.9 |
| abc transporter substrate-binding protein | Verru16B_RS17105 | Not Available | Positive | 4066538 - 4067482 | 33534.4 |
| sugar abc transporter atp-binding protein | Verru16B_RS17110 | Not Available | Positive | 4067554 - 4069068 | 54043.0 |
| abc transporter permease | Verru16B_RS17115 | Not Available | Positive | 4069240 - 4070247 | 34388.6 |
| galactofuranose abc transporter, permease protein yjff | Verru16B_RS17120 | Not Available | Positive | 4070244 - 4071209 | 32894.2 |
| alpha-l-arabinofuranosidase c-terminal domain-containing protein | Verru16B_RS17125 | Not Available | Negative | 4071431 - 4073434 | 72906.1 |
| nipsnap family protein | Verru16B_RS17130 | Not Available | Negative | 4073664 - 4074419 | 27612.1 |
| endo-1,4-beta-xylanase | Verru16B_RS17135 | Not Available | Negative | 4074608 - 4075723 | 41526.8 |
| hypothetical protein | Verru16B_RS17140 | Not Available | Positive | 4076143 - 4077642 | 53535.6 |
| hypothetical protein | Verru16B_RS17145 | Not Available | Positive | 4077660 - 4079312 | 61506.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
