Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citramalate synthase | Verru16B_RS17050 | Not Available | Negative | 4051277 - 4052884 | 58142.9 |
| 2-isopropylmalate synthase | Verru16B_RS17055 | Not Available | Negative | 4052888 - 4054504 | 56943.9 |
| ketol-acid reductoisomerase | Verru16B_RS17065 | Not Available | Negative | 4054730 - 4055740 | 36768.2 |
| acetolactate synthase small subunit | Verru16B_RS17070 | Not Available | Negative | 4055783 - 4056343 | 20281.5 |
| biosynthetic-type acetolactate synthase large subunit | Verru16B_RS17075 | Not Available | Negative | 4056356 - 4058209 | 66971.7 |
| dihydroxy-acid dehydratase | Verru16B_RS17080 | Not Available | Negative | 4058251 - 4059921 | 57864.9 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | Verru16B_RS17085 | Not Available | Negative | 4060281 - 4062770 | 87880.9 |
| alpha/beta fold hydrolase | Verru16B_RS17090 | Not Available | Negative | 4062767 - 4063687 | 32939.4 |
| hypothetical protein | Verru16B_RS19075 | Not Available | Negative | 4063861 - 4063983 | 4091.87 |
| glutamate 5-kinase | Verru16B_RS17095 | Not Available | Positive | 4064179 - 4064943 | 26699.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
