Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | Verru16B_RS17000 | Not Available | Positive | 4042083 - 4042517 | 16040.7 |
| energy transducer tonb | Verru16B_RS17005 | Not Available | Positive | 4042522 - 4043178 | 23809.8 |
| tetratricopeptide repeat protein | Verru16B_RS17010 | Not Available | Positive | 4043186 - 4044517 | 49931.1 |
| hypothetical protein | Verru16B_RS17015 | Not Available | Positive | 4044552 - 4045094 | 20598.7 |
| hypothetical protein | Verru16B_RS17020 | Not Available | Positive | 4045113 - 4045655 | 19949.1 |
| ammonium transporter | Verru16B_RS17025 | Not Available | Positive | 4046035 - 4047498 | 50506.7 |
| p-ii family nitrogen regulator | Verru16B_RS17030 | Not Available | Positive | 4047517 - 4047855 | 12230.0 |
| torf family putative porin | Verru16B_RS17035 | Not Available | Positive | 4048103 - 4048792 | 24324.2 |
| pyridoxal phosphate-dependent aminotransferase | Verru16B_RS17040 | Not Available | Negative | 4048969 - 4050177 | 43972.0 |
| 3-isopropylmalate dehydrogenase | Verru16B_RS17045 | Not Available | Negative | 4050208 - 4051280 | 37099.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
