Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pitrilysin family protein | Verru16B_RS16900 | Not Available | Negative | 4023372 - 4025930 | 92951.6 |
| minf_1886 family protein | Verru16B_RS16905 | Not Available | Negative | 4026147 - 4026575 | 16402.3 |
| fur family transcriptional regulator | Verru16B_RS16910 | Not Available | Positive | 4026723 - 4027253 | 19344.5 |
| ferredoxin | Verru16B_RS16915 | Not Available | Negative | 4027245 - 4027613 | 13194.8 |
| superoxide dismutase | Verru16B_RS16920 | Not Available | Negative | 4027691 - 4028425 | 26827.9 |
| pilz domain-containing protein | Verru16B_RS16925 | Not Available | Positive | 4028703 - 4029452 | 28108.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | Verru16B_RS16930 | Not Available | Negative | 4029503 - 4030948 | 52184.6 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | Verru16B_RS16935 | Not Available | Negative | 4031051 - 4032520 | 51412.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | Verru16B_RS16940 | Not Available | Negative | 4032523 - 4032813 | 10557.6 |
| hypothetical protein | Verru16B_RS16945 | Not Available | Positive | 4032941 - 4033744 | 29315.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
