Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | Verru16B_RS16850 | Not Available | Positive | 4015424 - 4016371 | 34847.7 |
| hypothetical protein | Verru16B_RS16855 | Not Available | Positive | 4016733 - 4017122 | 15316.2 |
| hypothetical protein | Verru16B_RS18145 | Not Available | Positive | 4017162 - 4017416 | 9434.79 |
| diaminopimelate epimerase | Verru16B_RS16865 | Not Available | Positive | 4017515 - 4018366 | 30819.9 |
| duf192 domain-containing protein | Verru16B_RS16870 | Not Available | Negative | 4018408 - 4018929 | 19329.7 |
| xaa-pro peptidase family protein | Verru16B_RS16875 | Not Available | Positive | 4019020 - 4020156 | 41419.2 |
| fpg/nei family dna glycosylase | Verru16B_RS16880 | Not Available | Positive | 4020240 - 4021085 | 31676.6 |
| tlya family rna methyltransferase | Verru16B_RS16885 | Not Available | Positive | 4021154 - 4021915 | 27559.2 |
| nad(+)/nadh kinase | Verru16B_RS16890 | Not Available | Positive | 4022018 - 4022860 | 30116.7 |
| hypothetical protein | Verru16B_RS16895 | Not Available | Negative | 4022938 - 4023300 | 13055.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
