Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr domain-containing protein | Verru16B_RS16800 | Not Available | Positive | 4003341 - 4004324 | 34290.0 |
| outer membrane beta-barrel protein | Verru16B_RS16805 | Not Available | Positive | 4004327 - 4005487 | 42490.3 |
| polysaccharide biosynthesis/export family protein | Verru16B_RS16810 | Not Available | Positive | 4005496 - 4006095 | 21662.3 |
| polysaccharide biosynthesis tyrosine autokinase | Verru16B_RS16815 | Not Available | Positive | 4006105 - 4008282 | 81294.8 |
| lpxi family protein | Verru16B_RS16820 | Not Available | Positive | 4008476 - 4009315 | 29599.6 |
| bifunctional nuclease family protein | Verru16B_RS16825 | Not Available | Positive | 4009542 - 4010012 | 17449.1 |
| pp_03361 | Verru16B_RS16830 | Not Available | Positive | 4010224 - 4011237 | Not Available |
| iron-sulfur cluster assembly protein | Verru16B_RS16835 | Not Available | Negative | 4011273 - 4011815 | 18930.8 |
| signal peptide peptidase sppa | Verru16B_RS16840 | Not Available | Negative | 4011825 - 4013672 | 66105.4 |
| nicotinate-nucleotide adenylyltransferase | Verru16B_RS16845 | Not Available | Positive | 4013854 - 4015368 | 56530.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
