Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter-associated beta strand repeat-containing protein | Verru16B_RS18185 | Not Available | Positive | 383853 - 386612 | 92957.8 |
| pep-cterm sorting domain-containing protein | Verru16B_RS01675 | Not Available | Positive | 386540 - 386959 | 13919.5 |
| sensor histidine kinase | Verru16B_RS01680 | Not Available | Positive | 387044 - 388234 | 43461.4 |
| response regulator transcription factor | Verru16B_RS01685 | Not Available | Positive | 388338 - 388994 | 23527.0 |
| m24 family metallopeptidase | Verru16B_RS01690 | Not Available | Positive | 389150 - 390427 | 46514.6 |
| heavy metal translocating p-type atpase metal-binding domain-containing protein | Verru16B_RS01695 | Not Available | Negative | 390463 - 392862 | 85988.5 |
| sulfite exporter taue/safe family protein | Verru16B_RS01700 | Not Available | Negative | 392958 - 393659 | 24413.7 |
| hypothetical protein | Verru16B_RS18190 | Not Available | Negative | 393656 - 393853 | 6772.27 |
| cytochrome c oxidase accessory protein ccog | Verru16B_RS01705 | Not Available | Negative | 393834 - 395345 | 55763.4 |
| cbb3-type cytochrome c oxidase n-terminal domain-containing protein | Verru16B_RS01710 | Not Available | Negative | 395397 - 395984 | 21028.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
