Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | Verru16B_RS16700 | Not Available | Negative | 3981797 - 3983407 | 59088.5 |
| abc transporter atp-binding protein | Verru16B_RS16705 | Not Available | Negative | 3983424 - 3984497 | 39770.2 |
| hypoxanthine phosphoribosyltransferase | Verru16B_RS16710 | Not Available | Positive | 3984681 - 3985250 | 20801.7 |
| Trna-ser | Not Available | Not Available | Positive | 3985347 - 3985436 | Not Available |
| abc transporter atp-binding protein | Verru16B_RS16720 | Not Available | Positive | 3985645 - 3986442 | 29787.2 |
| adenosylhomocysteinase | Verru16B_RS16725 | Not Available | Negative | 3986617 - 3988044 | 52258.6 |
| methionine adenosyltransferase | Verru16B_RS16730 | Not Available | Negative | 3988054 - 3989226 | 42426.7 |
| hybrid sensor histidine kinase/response regulator | Verru16B_RS16735 | Not Available | Positive | 3989364 - 3990485 | 40126.4 |
| response regulator transcription factor | Verru16B_RS16740 | Not Available | Positive | 3990482 - 3990883 | 14900.0 |
| hypothetical protein | Verru16B_RS18475 | Not Available | Positive | 3990880 - 3991083 | 7510.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
