Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine c-acetyltransferase | Verru16B_RS16650 | Not Available | Positive | 3973158 - 3974348 | 42236.8 |
| cytidine deaminase | Verru16B_RS16655 | Not Available | Positive | 3974438 - 3974842 | 13987.0 |
| hypothetical protein | Verru16B_RS16660 | Not Available | Positive | 3974865 - 3975191 | 12191.5 |
| alpha/beta hydrolase | Verru16B_RS16665 | Not Available | Negative | 3975316 - 3976104 | 28513.7 |
| histidine--trna ligase | Verru16B_RS16670 | Not Available | Negative | 3976206 - 3977516 | 47877.5 |
| hu family dna-binding protein | Verru16B_RS16675 | Not Available | Negative | 3977534 - 3977899 | 13585.8 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | Verru16B_RS16680 | Not Available | Positive | 3977982 - 3978677 | 25543.8 |
| iron-sulfur cluster insertion protein erpa | Verru16B_RS16685 | Not Available | Negative | 3978745 - 3979062 | 11253.2 |
| serine/threonine-protein kinase | Verru16B_RS16690 | Not Available | Positive | 3979195 - 3980178 | 36780.4 |
| rna polymerase factor sigma-54 | Verru16B_RS16695 | Not Available | Positive | 3980199 - 3981656 | 54471.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
