Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 3954842 - 3954918 | Not Available |
| atp-binding protein | Verru16B_RS16555 | Not Available | Positive | 3955248 - 3957116 | 67388.7 |
| sos response-associated peptidase | Verru16B_RS16560 | Not Available | Positive | 3957120 - 3957797 | 24703.8 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | Verru16B_RS16565 | Not Available | Positive | 3957928 - 3958491 | 19789.9 |
| aspartate carbamoyltransferase catalytic subunit | Verru16B_RS16570 | Not Available | Positive | 3958531 - 3959478 | 34549.1 |
| dihydroorotase | Verru16B_RS16575 | Not Available | Positive | 3959585 - 3960874 | 45994.7 |
| duf5069 domain-containing protein | Verru16B_RS16580 | Not Available | Positive | 3961056 - 3961472 | 16357.5 |
| ph domain-containing protein | Verru16B_RS16585 | Not Available | Positive | 3961557 - 3961985 | 15328.0 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | Verru16B_RS16590 | Not Available | Positive | 3962068 - 3962418 | 13180.6 |
| response regulator | Verru16B_RS16595 | Not Available | Negative | 3962437 - 3962862 | 15514.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
