Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma-like c-terminal region-containing protein | Verru16B_RS16400 | Not Available | Negative | 3910946 - 3914065 | 108712.0 |
| tolc family protein | Verru16B_RS16405 | Not Available | Negative | 3914591 - 3915958 | 49843.1 |
| efflux rnd transporter permease subunit | Verru16B_RS16410 | Not Available | Negative | 3915978 - 3919076 | 111494.0 |
| efflux rnd transporter periplasmic adaptor subunit | Verru16B_RS16415 | Not Available | Negative | 3919096 - 3920217 | 39178.2 |
| marr family winged helix-turn-helix transcriptional regulator | Verru16B_RS16420 | Not Available | Negative | 3920252 - 3920833 | 21203.6 |
| transketolase | Verru16B_RS16425 | Not Available | Negative | 3921011 - 3922999 | 70657.7 |
| 50s ribosomal protein l19 | Verru16B_RS16430 | Not Available | Negative | 3923130 - 3923495 | 13488.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | Verru16B_RS16435 | Not Available | Negative | 3923492 - 3924169 | 25102.2 |
| 30s ribosomal protein s16 | Verru16B_RS16440 | Not Available | Negative | 3924240 - 3924509 | 9792.9 |
| redox-regulated atpase ychf | Verru16B_RS16445 | Not Available | Positive | 3924638 - 3925741 | 39527.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
