Lacunisphaera limnophila str. IG16b

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Opitutia

Order

Opitutales

Family

Opitutaceae

Genus

Lacunisphaera

Description

Lacunisphaera limnophila str. IG16b is a freshwater bacterium characterized by a single replicon. The organism's genetic material is accessible through the accession number NZ_CP016094.1, which provides a reference for further research and analysis. As a member of the microbial community in freshwater habitats, Lacunisphaera limnophila str. IG16b plays a role in the aquatic ecosystem. Freshwater environments are often characterized by diverse microbial populations that contribute to nutrient cycling and the overall health of the ecosystem. The presence of this bacterium suggests it may be involved in interactions with other microorganisms or contribute to the degradation of organic materials within its habitat. The single replicon structure indicates a streamlined genomic organization, which may provide insights into its adaptability and efficiency in utilizing resources in freshwater environments. Understanding the specific metabolic pathways and ecological roles of Lacunisphaera limnophila str. IG16b can enhance knowledge of microbial dynamics in freshwater ecosystems and their contributions to ecological balance. Overall, the study of Lacunisphaera limnophila str. IG16b can offer valuable perspectives on microbial interactions in freshwater habitats, emphasizing the importance of such organisms in maintaining ecological integrity.

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassOpitutia
OrderOpitutales
FamilyOpitutaceae
GenusLacunisphaera
SpeciesLacunisphaera limnophila
StrainIG16b

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lacunisphaera limnophila strain IG16b chromosome, complete genome.

Gene Summary

Adenine Count

703412 bp

Thymine Count

704368 bp

Guanine Count

1404141 bp

Cytosine Count

1387363 bp

Genome Length

4199284 bp

Protein-coding Genes

3527 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
asma-like c-terminal region-containing proteinVerru16B_RS16400Not AvailableNegative3910946 - 3914065108712.0
tolc family proteinVerru16B_RS16405Not AvailableNegative3914591 - 391595849843.1
efflux rnd transporter permease subunitVerru16B_RS16410Not AvailableNegative3915978 - 3919076111494.0
efflux rnd transporter periplasmic adaptor subunitVerru16B_RS16415Not AvailableNegative3919096 - 392021739178.2
marr family winged helix-turn-helix transcriptional regulatorVerru16B_RS16420Not AvailableNegative3920252 - 392083321203.6
transketolaseVerru16B_RS16425Not AvailableNegative3921011 - 392299970657.7
50s ribosomal protein l19Verru16B_RS16430Not AvailableNegative3923130 - 392349513488.2
trna (guanosine(37)-n1)-methyltransferase trmdVerru16B_RS16435Not AvailableNegative3923492 - 392416925102.2
30s ribosomal protein s16Verru16B_RS16440Not AvailableNegative3924240 - 39245099792.9
redox-regulated atpase ychfVerru16B_RS16445Not AvailablePositive3924638 - 392574139527.6

Displaying genes 3321 – 3330 of 3578 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.