Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | Verru16B_RS16105 | Not Available | Negative | 3830434 - 3831363 | 34499.0 |
| cmpa/nrta family abc transporter substrate-binding protein | Verru16B_RS16110 | Not Available | Positive | 3831475 - 3832569 | 39325.4 |
| cmpa/nrta family abc transporter substrate-binding protein | Verru16B_RS16115 | Not Available | Positive | 3832520 - 3833818 | 47174.6 |
| hypothetical protein | Verru16B_RS16120 | Not Available | Positive | 3833827 - 3834084 | 9144.12 |
| nitrate abc transporter permease | Verru16B_RS16125 | Not Available | Positive | 3834081 - 3834866 | 28889.3 |
| 3-isopropylmalate dehydrogenase | Verru16B_RS19235 | Not Available | Positive | 3834912 - 3836644 | 60728.2 |
| alginate export family protein | Verru16B_RS16140 | Not Available | Positive | 3836784 - 3838304 | 56569.2 |
| nira family protein | Verru16B_RS16145 | Not Available | Positive | 3838452 - 3840290 | 66574.5 |
| sulfite reductase subunit alpha | Verru16B_RS16150 | Not Available | Positive | 3840328 - 3842103 | 62776.1 |
| dmsc/ynfh family molybdoenzyme membrane anchor subunit | Verru16B_RS16155 | Not Available | Positive | 3842152 - 3843699 | 55080.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
