Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6640 family protein | Verru16B_RS01570 | Not Available | Positive | 355233 - 355655 | 15535.1 |
| phosphohistidine phosphatase sixa | Verru16B_RS01575 | Not Available | Positive | 356007 - 356468 | 17261.0 |
| class i sam-dependent methyltransferase | Verru16B_RS01580 | Not Available | Negative | 356483 - 357133 | 24103.3 |
| duf3419 family protein | Verru16B_RS01585 | Not Available | Negative | 357148 - 358332 | 44920.1 |
| rida family protein | Verru16B_RS01590 | Not Available | Positive | 358510 - 358947 | 15664.0 |
| helix-turn-helix transcriptional regulator | Verru16B_RS01595 | Not Available | Negative | 359084 - 359353 | 9385.63 |
| duf2975 domain-containing protein | Verru16B_RS01600 | Not Available | Negative | 359365 - 359889 | 18820.4 |
| duf1552 domain-containing protein | Verru16B_RS01605 | Not Available | Negative | 360062 - 361411 | 49417.6 |
| duf1592 domain-containing protein | Verru16B_RS01610 | Not Available | Negative | 361408 - 364851 | 124587.0 |
| nad(p)-dependent alcohol dehydrogenase | Verru16B_RS01615 | Not Available | Positive | 365006 - 366070 | 37721.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
