Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | Verru16B_RS15615 | Not Available | Positive | 3700923 - 3701585 | 25235.2 |
| 3'-5' exoribonuclease yham family protein | Verru16B_RS15620 | Not Available | Positive | 3701657 - 3702640 | 35631.1 |
| type ii secretion system f family protein | Verru16B_RS15625 | Not Available | Negative | 3702767 - 3704011 | 44392.3 |
| gspe/pule family protein | Verru16B_RS15630 | Not Available | Negative | 3704178 - 3705854 | 60240.0 |
| type iv pilus twitching motility protein pilt | Verru16B_RS15635 | Not Available | Negative | 3705877 - 3706959 | 39875.4 |
| gspe/pule family protein | Verru16B_RS15640 | Not Available | Negative | 3706989 - 3708587 | 57363.6 |
| transcription termination factor rho | Verru16B_RS15645 | Not Available | Negative | 3708616 - 3710547 | 69159.6 |
| dephospho-coa kinase | Verru16B_RS15650 | Not Available | Negative | 3710531 - 3711154 | 23073.9 |
| hd domain-containing protein | Verru16B_RS15655 | Not Available | Positive | 3711237 - 3712091 | 32049.2 |
| yifb family mg chelatase-like aaa atpase | Verru16B_RS15660 | Not Available | Positive | 3712119 - 3713654 | 54879.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
