Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein j | Verru16B_RS15525 | Not Available | Negative | 3678887 - 3679936 | 37289.7 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | Verru16B_RS15530 | Not Available | Negative | 3679969 - 3680577 | 21485.2 |
| hypothetical protein | Verru16B_RS15535 | Not Available | Negative | 3680591 - 3681253 | 22305.1 |
| type ii secretion system protein | Verru16B_RS15540 | Not Available | Negative | 3681337 - 3682131 | 28467.1 |
| type ii secretion system protein | Verru16B_RS15545 | Not Available | Negative | 3682019 - 3682588 | 20294.2 |
| acetate--coa ligase | Verru16B_RS15550 | Not Available | Negative | 3682635 - 3684593 | 72704.2 |
| transcription termination factor rho | Verru16B_RS15555 | Not Available | Positive | 3684701 - 3685876 | 43923.0 |
| hypothetical protein | Verru16B_RS15560 | Not Available | Positive | 3685929 - 3687686 | 66220.6 |
| polyphosphate:amp phosphotransferase | Verru16B_RS15565 | Not Available | Negative | 3687908 - 3689383 | 57073.4 |
| polyphosphate kinase 2 | Verru16B_RS15570 | Not Available | Positive | 3689519 - 3690454 | 37034.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
