Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | Verru16B_RS15475 | Not Available | Negative | 3668266 - 3669300 | 36596.3 |
| l,d-transpeptidase | Verru16B_RS15480 | Not Available | Positive | 3669301 - 3669852 | 20267.3 |
| hypothetical protein | Verru16B_RS15485 | Not Available | Negative | 3669911 - 3670432 | 19634.7 |
| heavy metal translocating p-type atpase | Verru16B_RS15490 | Not Available | Negative | 3670548 - 3672785 | 79329.2 |
| atp-dependent dna helicase | Verru16B_RS15495 | Not Available | Positive | 3672951 - 3675017 | 75659.6 |
| pp2c family serine/threonine-protein phosphatase | Verru16B_RS15500 | Not Available | Positive | 3675052 - 3675765 | 25924.1 |
| molecular chaperone dnaj | Verru16B_RS15505 | Not Available | Positive | 3675841 - 3676161 | 11862.4 |
| ntp transferase domain-containing protein | Verru16B_RS15510 | Not Available | Negative | 3676230 - 3677177 | 34064.5 |
| Trna-met | Not Available | Not Available | Positive | 3677395 - 3677469 | Not Available |
| hypothetical protein | Verru16B_RS15520 | Not Available | Negative | 3677556 - 3678716 | 40377.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
