Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3108 domain-containing protein | Verru16B_RS15430 | Not Available | Positive | 3660615 - 3661367 | 27792.7 |
| dna-3-methyladenine glycosylase | Verru16B_RS15435 | Not Available | Negative | 3661459 - 3661986 | 19240.4 |
| 50s ribosomal protein l21 | Verru16B_RS15440 | Not Available | Positive | 3662131 - 3662445 | 11489.1 |
| 50s ribosomal protein l27 | Verru16B_RS15445 | Not Available | Positive | 3662470 - 3662709 | 8463.19 |
| hypothetical protein | Verru16B_RS15450 | Not Available | Positive | 3662954 - 3663286 | 12088.4 |
| smc-scp complex subunit scpb | Verru16B_RS15455 | Not Available | Negative | 3663389 - 3664291 | 32179.8 |
| glucose-6-phosphate isomerase | Verru16B_RS15460 | Not Available | Positive | 3664423 - 3666012 | 57649.6 |
| hypothetical protein | Verru16B_RS18555 | Not Available | Positive | 3666105 - 3666257 | 5508.72 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | Verru16B_RS15465 | Not Available | Positive | 3666292 - 3667014 | 25475.9 |
| ppx/gppa phosphatase family protein | Verru16B_RS15470 | Not Available | Positive | 3667154 - 3668098 | 33651.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
