Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | Verru16B_RS15235 | Not Available | Negative | 3617205 - 3618395 | 42281.4 |
| ribbon-helix-helix protein, copg family | Verru16B_RS15240 | Not Available | Negative | 3618579 - 3619034 | 16866.9 |
| outer membrane lipoprotein-sorting protein | Verru16B_RS15245 | Not Available | Negative | 3619037 - 3619846 | 28919.1 |
| preprotein translocase subunit secg | Verru16B_RS15250 | Not Available | Negative | 3619875 - 3620255 | 12684.5 |
| parb/repb/spo0j family partition protein | Verru16B_RS15255 | Not Available | Negative | 3620491 - 3621411 | 32624.6 |
| lysm peptidoglycan-binding domain-containing protein | Verru16B_RS15260 | Not Available | Negative | 3621414 - 3621983 | 20584.7 |
| methionyl-trna formyltransferase | Verru16B_RS15265 | Not Available | Negative | 3622021 - 3623028 | 34729.4 |
| ribosome biogenesis gtpase der | Verru16B_RS15270 | Not Available | Negative | 3623109 - 3624608 | 55534.9 |
| response regulator | Verru16B_RS18395 | Not Available | Positive | 3624729 - 3625109 | 14296.2 |
| signal recognition particle protein | Verru16B_RS15280 | Not Available | Positive | 3625303 - 3626646 | 48458.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
