Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS14940 | Not Available | Positive | 3568876 - 3569355 | 16686.1 |
| site-2 protease family protein | Verru16B_RS14945 | Not Available | Negative | 3569394 - 3569975 | 21513.3 |
| response regulator | Verru16B_RS14950 | Not Available | Positive | 3570478 - 3570861 | 13994.1 |
| gfo/idh/moca family protein | Verru16B_RS14955 | Not Available | Positive | 3571021 - 3572376 | 49394.8 |
| hypothetical protein | Verru16B_RS14960 | Not Available | Negative | 3572405 - 3572692 | 10359.1 |
| lytic transglycosylase domain-containing protein | Verru16B_RS14965 | Not Available | Negative | 3572753 - 3573274 | 19018.1 |
| hypothetical protein | Verru16B_RS18375 | Not Available | Negative | 3573193 - 3573708 | 18069.4 |
| hypothetical protein | Verru16B_RS14975 | Not Available | Positive | 3573827 - 3574507 | 23584.9 |
| duf6172 family protein | Verru16B_RS14980 | Not Available | Negative | 3574648 - 3574941 | 10497.6 |
| ykgj family cysteine cluster protein | Verru16B_RS14985 | Not Available | Negative | 3575500 - 3576201 | 25076.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
