Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gatb/yqey domain-containing protein | Verru16B_RS14845 | Not Available | Positive | 3547667 - 3548119 | 15808.2 |
| hypothetical protein | Verru16B_RS14850 | Not Available | Positive | 3548252 - 3549223 | 35905.7 |
| pp_02952 | Verru16B_RS14855 | Not Available | Negative | 3549144 - 3549920 | Not Available |
| gfo/idh/moca family protein | Verru16B_RS14860 | Not Available | Negative | 3550149 - 3551189 | 37541.8 |
| hypothetical protein | Verru16B_RS14865 | Not Available | Positive | 3551334 - 3551897 | 20843.3 |
| gfo/idh/moca family protein | Verru16B_RS14870 | Not Available | Negative | 3552139 - 3553539 | 51547.8 |
| rna helicase | Verru16B_RS14875 | Not Available | Positive | 3553692 - 3556328 | 98459.0 |
| spermine synthase | Verru16B_RS14880 | Not Available | Negative | 3556370 - 3557080 | 25859.6 |
| nadp-dependent isocitrate dehydrogenase | Verru16B_RS14885 | Not Available | Positive | 3557538 - 3559766 | 79488.5 |
| four helix bundle suffix domain-containing protein | Verru16B_RS14890 | Not Available | Negative | 3559798 - 3560373 | 21934.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
