Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | Verru16B_RS01475 | Not Available | Negative | 331425 - 332153 | 26732.2 |
| toprim domain-containing protein | Verru16B_RS01480 | Not Available | Positive | 332923 - 334764 | 69416.9 |
| dna gyrase/topoisomerase iv subunit a | Verru16B_RS01485 | Not Available | Positive | 334980 - 337178 | 81769.0 |
| sigma-70 family rna polymerase sigma factor | Verru16B_RS01490 | Not Available | Negative | 337259 - 338866 | 58040.4 |
| cia30 family protein | Verru16B_RS01495 | Not Available | Positive | 339142 - 339753 | 22128.6 |
| acyltransferase family protein | Verru16B_RS01500 | Not Available | Positive | 339801 - 341042 | 46450.6 |
| abrb/maze/spovt family dna-binding domain-containing protein | Verru16B_RS17700 | Not Available | Negative | 341091 - 341255 | 5948.5 |
| hnh endonuclease | Verru16B_RS01505 | Not Available | Positive | 341311 - 342297 | 37250.4 |
| hypothetical protein | Verru16B_RS01510 | Not Available | Negative | 342287 - 342886 | 22344.3 |
| hypothetical protein | Verru16B_RS01515 | Not Available | Positive | 343081 - 343803 | 25901.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
