Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2851 family protein | Verru16B_RS00105 | Not Available | Negative | 17200 - 18399 | 44410.1 |
| Trna-ser | Not Available | Not Available | Positive | 18505 - 18592 | Not Available |
| zinc metallopeptidase | Verru16B_RS00115 | Not Available | Negative | 18811 - 19503 | 24529.4 |
| m3 family metallopeptidase | Verru16B_RS00120 | Not Available | Negative | 19606 - 21663 | 76001.7 |
| hypothetical protein | Verru16B_RS00125 | Not Available | Negative | 21727 - 23214 | 53656.1 |
| tonb-dependent receptor | Verru16B_RS00130 | Not Available | Negative | 23630 - 25483 | 68024.0 |
| ferredoxin | Verru16B_RS00135 | Not Available | Negative | 25572 - 25805 | 8526.74 |
| rhomboid family intramembrane serine protease | Verru16B_RS00140 | Not Available | Positive | 25929 - 26822 | 33059.5 |
| carboxy terminal-processing peptidase | Verru16B_RS00145 | Not Available | Positive | 26915 - 29113 | 81477.3 |
| peptide chain release factor n(5)-glutamine methyltransferase | Verru16B_RS00150 | Not Available | Negative | 29099 - 29944 | 30379.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
