Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | Verru16B_RS14795 | Not Available | Negative | 3539918 - 3540712 | 28443.8 |
| response regulator transcription factor | Verru16B_RS14800 | Not Available | Negative | 3540716 - 3541402 | 24321.9 |
| response regulator transcription factor | Verru16B_RS14805 | Not Available | Negative | 3541567 - 3542334 | 27670.1 |
| tyrosine recombinase xerc | Verru16B_RS14810 | Not Available | Negative | 3542451 - 3543410 | 35636.1 |
| yabn family protein | Verru16B_RS14815 | Not Available | Negative | 3543376 - 3544035 | 24536.4 |
| indole-3-glycerol phosphate synthase trpc | Verru16B_RS14820 | Not Available | Positive | 3544136 - 3544936 | 28505.5 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | Verru16B_RS14825 | Not Available | Positive | 3544979 - 3545803 | 29867.5 |
| hypothetical protein | Verru16B_RS14830 | Not Available | Positive | 3545852 - 3546517 | 24741.6 |
| grea/greb family elongation factor | Verru16B_RS14835 | Not Available | Positive | 3546521 - 3547003 | 16791.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | Verru16B_RS14840 | Not Available | Positive | 3547196 - 3547528 | 11639.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
