Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yicc/yloc family endoribonuclease | Verru16B_RS14665 | Not Available | Negative | 3504556 - 3505425 | 31949.1 |
| tryptophan synthase subunit beta | Verru16B_RS14670 | Not Available | Negative | 3505422 - 3506639 | 43769.9 |
| pp2c family protein-serine/threonine phosphatase | Verru16B_RS14675 | Not Available | Negative | 3506698 - 3508137 | 52105.9 |
| stas domain-containing protein | Verru16B_RS14680 | Not Available | Negative | 3508247 - 3508753 | 17925.7 |
| aconitate hydratase acna | Verru16B_RS14685 | Not Available | Negative | 3508793 - 3511468 | 96156.8 |
| redoxin domain-containing protein | Verru16B_RS14690 | Not Available | Negative | 3511592 - 3512062 | 16379.8 |
| four helix bundle protein | Verru16B_RS14695 | Not Available | Negative | 3512338 - 3512712 | 14148.8 |
| tyrosine--trna ligase | Verru16B_RS14700 | Not Available | Positive | 3513057 - 3514340 | 46377.5 |
| o-antigen ligase | Verru16B_RS14705 | Not Available | Positive | 3514577 - 3516439 | 70068.8 |
| hypothetical protein | Verru16B_RS14710 | Not Available | Negative | 3516575 - 3518962 | 87911.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
