Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | Verru16B_RS14615 | Not Available | Positive | 3493517 - 3493864 | 12948.9 |
| vf530 family dna-binding protein | Verru16B_RS14620 | Not Available | Positive | 3493922 - 3494185 | 9974.94 |
| hypothetical protein | Verru16B_RS14625 | Not Available | Positive | 3494196 - 3494600 | 15544.1 |
| hypothetical protein | Verru16B_RS14630 | Not Available | Negative | 3494649 - 3495845 | 44118.9 |
| oxygen-dependent coproporphyrinogen oxidase | Verru16B_RS14635 | Not Available | Positive | 3496284 - 3497225 | 34968.2 |
| uroporphyrinogen decarboxylase | Verru16B_RS14640 | Not Available | Positive | 3497319 - 3498344 | 37901.2 |
| protoporphyrinogen oxidase | Verru16B_RS14645 | Not Available | Positive | 3498459 - 3499832 | 49185.5 |
| isoleucine--trna ligase | Verru16B_RS14650 | Not Available | Positive | 3499977 - 3502817 | 104345.0 |
| trar/dksa c4-type zinc finger protein | Verru16B_RS14655 | Not Available | Positive | 3502833 - 3503858 | 36441.6 |
| signal peptidase ii | Verru16B_RS14660 | Not Available | Positive | 3503964 - 3504473 | 18884.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
