Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase | Verru16B_RS14515 | Not Available | Positive | 3476359 - 3477090 | 25425.7 |
| holliday junction branch migration protein ruva | Verru16B_RS14520 | Not Available | Positive | 3477087 - 3477695 | 20927.5 |
| anti-sigma factor | Verru16B_RS14525 | Not Available | Negative | 3477748 - 3478449 | 25892.6 |
| sigma-70 family rna polymerase sigma factor | Verru16B_RS14530 | Not Available | Negative | 3478446 - 3479051 | 23362.4 |
| Trna-lys | Not Available | Not Available | Positive | 3479234 - 3479308 | Not Available |
| response regulator transcription factor | Verru16B_RS14540 | Not Available | Positive | 3479417 - 3480082 | 24144.5 |
| ompa family protein | Verru16B_RS14545 | Not Available | Positive | 3480171 - 3480722 | 19716.5 |
| alpha-l-fucosidase | Verru16B_RS14550 | Not Available | Negative | 3480806 - 3482302 | 56134.5 |
| m20/m25/m40 family metallo-hydrolase | Verru16B_RS14555 | Not Available | Negative | 3482390 - 3483757 | 50044.6 |
| m48 family metallopeptidase | Verru16B_RS14560 | Not Available | Negative | 3483809 - 3484591 | 27987.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
