Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb family protein | Verru16B_RS14415 | Not Available | Positive | 3456126 - 3456971 | 30397.6 |
| Trna-ala | Not Available | Not Available | Positive | 3457047 - 3457122 | Not Available |
| site-2 protease family protein | Verru16B_RS14425 | Not Available | Negative | 3457161 - 3457949 | 29277.7 |
| sigma-54 dependent transcriptional regulator | Verru16B_RS14430 | Not Available | Positive | 3458005 - 3459375 | 49721.8 |
| udp-glucose 4-epimerase gale | Verru16B_RS14435 | Not Available | Negative | 3459456 - 3460448 | 35778.8 |
| beta-ketoacyl synthase | Verru16B_RS14440 | Not Available | Positive | 3460520 - 3461758 | 44258.7 |
| acyl carrier protein | Verru16B_RS14445 | Not Available | Positive | 3461775 - 3462029 | 9612.58 |
| nad(p)/fad-dependent oxidoreductase | Verru16B_RS14450 | Not Available | Positive | 3462135 - 3463550 | 51783.2 |
| sugar phosphate isomerase/epimerase | Verru16B_RS14455 | Not Available | Positive | 3463576 - 3464439 | 31152.4 |
| nad(p)/fad-dependent oxidoreductase | Verru16B_RS14460 | Not Available | Positive | 3464481 - 3465932 | 54231.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
