Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphatase | Verru16B_RS14365 | Not Available | Positive | 3445669 - 3446253 | 20764.0 |
| hypothetical protein | Verru16B_RS14370 | Not Available | Positive | 3446265 - 3447386 | 40608.2 |
| rlua family pseudouridine synthase | Verru16B_RS14375 | Not Available | Positive | 3447383 - 3448147 | 28739.3 |
| dna mismatch repair protein muts | Verru16B_RS14380 | Not Available | Negative | 3448178 - 3450754 | 94249.3 |
| alpha/beta fold hydrolase | Verru16B_RS14385 | Not Available | Positive | 3450877 - 3451650 | 28370.3 |
| mate family efflux transporter | Verru16B_RS14390 | Not Available | Negative | 3451681 - 3453069 | 50293.4 |
| dna polymerase iii subunit gamma/tau | Verru16B_RS14395 | Not Available | Negative | 3453199 - 3454191 | 36611.9 |
| dtmp kinase | Verru16B_RS14400 | Not Available | Negative | 3454213 - 3454863 | 23812.7 |
| mota/tolq/exbb proton channel family protein | Verru16B_RS14405 | Not Available | Positive | 3454980 - 3455687 | 26181.1 |
| biopolymer transporter exbd | Verru16B_RS14410 | Not Available | Positive | 3455695 - 3456120 | 16243.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
