Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | Verru16B_RS14115 | Not Available | Negative | 3378224 - 3379831 | 56442.2 |
| endonuclease/exonuclease/phosphatase family protein | Verru16B_RS14120 | Not Available | Positive | 3380093 - 3381037 | 34937.7 |
| hypothetical protein | Verru16B_RS14125 | Not Available | Negative | 3381068 - 3381253 | 6142.95 |
| hypothetical protein | Verru16B_RS14130 | Not Available | Negative | 3381306 - 3381749 | 15499.8 |
| rna polymerase sigma factor | Verru16B_RS14135 | Not Available | Negative | 3381884 - 3382477 | 22414.7 |
| aminopeptidase | Verru16B_RS14140 | Not Available | Negative | 3382572 - 3383807 | 44717.6 |
| kelch repeat-containing protein | Verru16B_RS14145 | Not Available | Negative | 3383819 - 3384784 | 34407.2 |
| hypothetical protein | Verru16B_RS14150 | Not Available | Negative | 3384811 - 3385338 | 19641.6 |
| ketose-bisphosphate aldolase | Verru16B_RS14155 | Not Available | Negative | 3385519 - 3386469 | 34428.2 |
| type ia dna topoisomerase | Verru16B_RS14160 | Not Available | Negative | 3386763 - 3389588 | 105673.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
