Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | Verru16B_RS14065 | Not Available | Positive | 3367493 - 3368404 | 32075.2 |
| ybab/ebfc family nucleoid-associated protein | Verru16B_RS14070 | Not Available | Positive | 3368601 - 3368909 | 11021.5 |
| recombination mediator recr | Verru16B_RS14075 | Not Available | Positive | 3369011 - 3369604 | 21136.5 |
| Trna-gly | Not Available | Not Available | Positive | 3369757 - 3369830 | Not Available |
| hypothetical protein | Verru16B_RS14085 | Not Available | Positive | 3369898 - 3370143 | 8536.41 |
| 1-deoxy-d-xylulose-5-phosphate synthase | Verru16B_RS14090 | Not Available | Negative | 3370374 - 3372305 | 69551.4 |
| exodeoxyribonuclease vii small subunit | Verru16B_RS14095 | Not Available | Negative | 3372328 - 3372576 | 9008.76 |
| m48 family metallopeptidase | Verru16B_RS14100 | Not Available | Positive | 3372760 - 3373998 | 45020.4 |
| pas domain s-box protein | Verru16B_RS14105 | Not Available | Negative | 3373995 - 3376973 | 107625.0 |
| hypothetical protein | Verru16B_RS14110 | Not Available | Negative | 3376998 - 3378227 | 44839.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
