Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | Verru16B_RS14010 | Not Available | Negative | 3357366 - 3358205 | 31104.2 |
| hypothetical protein | Verru16B_RS14020 | Not Available | Negative | 3358174 - 3359154 | 36654.1 |
| alpha-1,2-fucosyltransferase | Verru16B_RS14025 | Not Available | Negative | 3359162 - 3360025 | 32408.0 |
| fkbm family methyltransferase | Verru16B_RS14030 | Not Available | Negative | 3360022 - 3360813 | 29117.9 |
| duf268 domain-containing protein | Verru16B_RS14035 | Not Available | Negative | 3360828 - 3361622 | 29475.5 |
| abc transporter atp-binding protein | Verru16B_RS14040 | Not Available | Negative | 3361619 - 3362872 | 45578.8 |
| abc transporter permease | Verru16B_RS14045 | Not Available | Negative | 3362876 - 3363706 | 30667.4 |
| glycosyltransferase family 4 protein | Verru16B_RS14050 | Not Available | Negative | 3363709 - 3364788 | 39922.7 |
| asparagine synthase (glutamine-hydrolyzing) | Verru16B_RS14055 | Not Available | Negative | 3364785 - 3366683 | 70158.3 |
| dj-1 family glyoxalase iii | Verru16B_RS14060 | Not Available | Negative | 3366844 - 3367383 | 18732.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
