Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein | Verru16B_RS19180 | Not Available | Positive | 304879 - 305871 | 34689.3 |
| m23 family metallopeptidase | Verru16B_RS01375 | Not Available | Positive | 305907 - 306710 | 29715.0 |
| glycoside hydrolase family 5 protein | Verru16B_RS01380 | Not Available | Positive | 306776 - 307801 | 36980.6 |
| hypothetical protein | Verru16B_RS18720 | Not Available | Negative | 308011 - 308982 | 33039.6 |
| dead/deah box helicase | Verru16B_RS18725 | Not Available | Positive | 309255 - 310757 | 54572.4 |
| hdod domain-containing protein | Verru16B_RS01400 | Not Available | Negative | 310758 - 312305 | 55898.1 |
| s9 family peptidase | Verru16B_RS01405 | Not Available | Positive | 312561 - 314576 | 73862.1 |
| redoxin domain-containing protein | Verru16B_RS01410 | Not Available | Negative | 314779 - 315921 | 42269.4 |
| pd40 domain-containing protein | Verru16B_RS01415 | Not Available | Negative | 315952 - 317058 | 38870.0 |
| glycosyl hydrolase | Verru16B_RS01420 | Not Available | Positive | 317154 - 318191 | 38317.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
