Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | Verru16B_RS13765 | Not Available | Negative | 3297420 - 3298241 | 30011.8 |
| rossmann fold nucleotide-binding protein | Verru16B_RS13770 | Not Available | Negative | 3298363 - 3298890 | 17979.7 |
| hypothetical protein | Verru16B_RS13775 | Not Available | Negative | 3298887 - 3299183 | 11014.4 |
| rsmb/nop family class i sam-dependent rna methyltransferase | Verru16B_RS13780 | Not Available | Negative | 3299194 - 3300423 | 45475.2 |
| lps-assembly protein lptd | Verru16B_RS13785 | Not Available | Negative | 3300535 - 3302628 | 78284.8 |
| 1,4-alpha-glucan branching protein glgb | Verru16B_RS13790 | Not Available | Positive | 3302888 - 3305110 | 84284.7 |
| duf1080 domain-containing protein | Verru16B_RS13795 | Not Available | Positive | 3305245 - 3305895 | 23991.6 |
| tolc family protein | Verru16B_RS13800 | Not Available | Negative | 3305989 - 3307419 | 52448.5 |
| ycii family protein | Verru16B_RS13805 | Not Available | Negative | 3307659 - 3308063 | 14635.9 |
| sulfite exporter taue/safe family protein | Verru16B_RS13810 | Not Available | Negative | 3308147 - 3308503 | 12272.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
