Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | Verru16B_RS13510 | Not Available | Negative | 3236136 - 3237008 | 30891.4 |
| nadh-quinone oxidoreductase subunit a | Verru16B_RS13515 | Not Available | Positive | 3237128 - 3237499 | 13919.5 |
| pts sugar transporter subunit iia | Verru16B_RS13520 | Not Available | Positive | 3237610 - 3238962 | 48738.2 |
| 50s ribosomal protein l33 | Verru16B_RS13525 | Not Available | Positive | 3239118 - 3239282 | 6543.03 |
| hypothetical protein | Verru16B_RS13530 | Not Available | Negative | 3239411 - 3239677 | 10229.0 |
| mrp/nbp35 family atp-binding protein | Verru16B_RS13535 | Not Available | Negative | 3239785 - 3240861 | 37042.3 |
| pd40 domain-containing protein | Verru16B_RS13540 | Not Available | Positive | 3240974 - 3242149 | 41272.8 |
| tigr00282 family metallophosphoesterase | Verru16B_RS13545 | Not Available | Positive | 3242153 - 3242932 | 27415.0 |
| pig-l deacetylase family protein | Verru16B_RS13550 | Not Available | Positive | 3243000 - 3243851 | 31411.7 |
| osmc family protein | Verru16B_RS13555 | Not Available | Positive | 3243991 - 3244404 | 14560.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
