Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | Verru16B_RS13460 | Not Available | Negative | 3226736 - 3228187 | 51716.9 |
| polysaccharide biosynthesis/export family protein | Verru16B_RS13465 | Not Available | Negative | 3228205 - 3228798 | 21581.8 |
| hypothetical protein | Verru16B_RS13470 | Not Available | Negative | 3228848 - 3229636 | 30307.3 |
| quinone-dependent dihydroorotate dehydrogenase | Verru16B_RS13475 | Not Available | Positive | 3229846 - 3230907 | 37450.5 |
| serine o-acetyltransferase epsc | Verru16B_RS13480 | Not Available | Negative | 3231079 - 3231993 | 32972.4 |
| giy-yig nuclease family protein | Verru16B_RS13485 | Not Available | Negative | 3232070 - 3232327 | 10022.0 |
| Trna-leu | Not Available | Not Available | Positive | 3232465 - 3232549 | Not Available |
| hypothetical protein | Verru16B_RS13495 | Not Available | Positive | 3232732 - 3234654 | 69287.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | Verru16B_RS13500 | Not Available | Negative | 3234765 - 3235199 | 15661.9 |
| thiamine-monophosphate kinase | Verru16B_RS13505 | Not Available | Negative | 3235183 - 3236139 | 33958.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
