Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | Verru16B_RS13410 | Not Available | Positive | 3213278 - 3215800 | 93599.2 |
| hypothetical protein | Verru16B_RS13415 | Not Available | Positive | 3215874 - 3217685 | 66950.0 |
| mota/tolq/exbb proton channel family protein | Verru16B_RS13420 | Not Available | Positive | 3217741 - 3218304 | 19993.0 |
| biopolymer transporter exbd | Verru16B_RS13425 | Not Available | Positive | 3218313 - 3218699 | 14543.0 |
| adenylate/guanylate cyclase domain-containing protein | Verru16B_RS13430 | Not Available | Positive | 3218773 - 3219852 | 40338.3 |
| tetratricopeptide repeat protein | Verru16B_RS13435 | Not Available | Negative | 3219992 - 3220489 | 17828.2 |
| threonine--trna ligase | Verru16B_RS13440 | Not Available | Negative | 3220567 - 3222507 | 72612.7 |
| cysteine--trna ligase | Verru16B_RS13445 | Not Available | Negative | 3222715 - 3224085 | 50242.6 |
| porphobilinogen synthase | Verru16B_RS13450 | Not Available | Positive | 3224275 - 3225285 | 36499.2 |
| gfo/idh/moca family oxidoreductase | Verru16B_RS13455 | Not Available | Positive | 3225305 - 3226702 | 51905.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
