Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | Verru16B_RS13310 | Not Available | Positive | 3188171 - 3189031 | 30990.6 |
| m14 family metallocarboxypeptidase | Verru16B_RS13315 | Not Available | Negative | 3188979 - 3189728 | 27730.9 |
| glutamate--trna ligase | Verru16B_RS13320 | Not Available | Positive | 3189995 - 3191389 | 51920.3 |
| protein-glutamate o-methyltransferase cher | Verru16B_RS13325 | Not Available | Negative | 3191539 - 3192414 | 32891.6 |
| chemotaxis response regulator protein-glutamate methylesterase | Verru16B_RS13330 | Not Available | Negative | 3192418 - 3193497 | 37452.8 |
| response regulator | Verru16B_RS13335 | Not Available | Negative | 3193510 - 3193881 | 13640.6 |
| pas domain-containing protein | Verru16B_RS13340 | Not Available | Negative | 3193924 - 3197163 | 116084.0 |
| chemotaxis protein chew | Verru16B_RS13345 | Not Available | Negative | 3197195 - 3197626 | 15390.0 |
| chemotaxis protein chea | Verru16B_RS13350 | Not Available | Negative | 3197633 - 3199975 | 82967.1 |
| response regulator | Verru16B_RS13355 | Not Available | Negative | 3199998 - 3200390 | 13868.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
