Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | Verru16B_RS13260 | Not Available | Positive | 3177087 - 3179624 | 92260.2 |
| ynce family protein | Verru16B_RS13265 | Not Available | Positive | 3179624 - 3182776 | 114938.0 |
| sumf1/egtb/pvdo family nonheme iron enzyme | Verru16B_RS13270 | Not Available | Positive | 3182773 - 3183789 | 37699.4 |
| sumf1/egtb/pvdo family nonheme iron enzyme | Verru16B_RS13275 | Not Available | Positive | 3183791 - 3184873 | 39529.3 |
| hypothetical protein | Verru16B_RS13280 | Not Available | Positive | 3184870 - 3185166 | 10853.9 |
| hypothetical protein | Verru16B_RS13285 | Not Available | Positive | 3185209 - 3185937 | 26636.1 |
| rid family hydrolase | Verru16B_RS13290 | Not Available | Positive | 3185937 - 3186377 | 15565.7 |
| Trna-arg | Not Available | Not Available | Positive | 3186673 - 3186749 | Not Available |
| duf1080 domain-containing protein | Verru16B_RS13300 | Not Available | Negative | 3186850 - 3187482 | 23273.5 |
| ribosome hibernation-promoting factor, hpf/yfia family | Verru16B_RS13305 | Not Available | Negative | 3187576 - 3187953 | 14547.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
