Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | Verru16B_RS13210 | Not Available | Negative | 3155187 - 3157031 | 67080.0 |
| phosphoenolpyruvate carboxylase | Verru16B_RS13215 | Not Available | Positive | 3157220 - 3159970 | 102072.0 |
| glycoside hydrolase family 2 protein | Verru16B_RS13220 | Not Available | Negative | 3160011 - 3163016 | 108530.0 |
| biosynthetic arginine decarboxylase | Verru16B_RS13225 | Not Available | Negative | 3163109 - 3165049 | 73105.0 |
| preprotein translocase subunit yajc | Verru16B_RS13230 | Not Available | Positive | 3165149 - 3165469 | 11512.3 |
| protein translocase subunit secdf | Verru16B_RS13235 | Not Available | Positive | 3165538 - 3168081 | 92444.9 |
| single-stranded-dna-specific exonuclease recj | Verru16B_RS13240 | Not Available | Positive | 3168100 - 3169815 | 62396.2 |
| deda family protein | Verru16B_RS13245 | Not Available | Positive | 3169837 - 3170469 | 24100.7 |
| fg-gap-like repeat-containing protein | Verru16B_RS13250 | Not Available | Negative | 3170833 - 3174423 | 127970.0 |
| thioredoxin domain-containing protein | Verru16B_RS13255 | Not Available | Negative | 3174623 - 3176824 | 80249.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
