Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein gcvh | Verru16B_RS13160 | Not Available | Positive | 3135374 - 3135757 | 13265.8 |
| efflux rnd transporter periplasmic adaptor subunit | Verru16B_RS13165 | Not Available | Positive | 3135803 - 3136912 | 39601.8 |
| efflux rnd transporter permease subunit | Verru16B_RS13170 | Not Available | Positive | 3136916 - 3140059 | 114921.0 |
| hypothetical protein | Verru16B_RS13175 | Not Available | Positive | 3140105 - 3140683 | 21035.5 |
| translational gtpase typa | Verru16B_RS13180 | Not Available | Negative | 3140830 - 3142653 | 67191.2 |
| duf5060 domain-containing protein | Verru16B_RS13185 | Not Available | Positive | 3143928 - 3145844 | 71423.5 |
| cpbp family intramembrane glutamic endopeptidase | Verru16B_RS13190 | Not Available | Negative | 3145921 - 3146799 | 31084.5 |
| hypothetical protein | Verru16B_RS13195 | Not Available | Positive | 3147186 - 3148313 | 39361.0 |
| hypothetical protein | Verru16B_RS13200 | Not Available | Positive | 3148381 - 3152520 | 151939.0 |
| atp-dependent helicase hrpb | Verru16B_RS13205 | Not Available | Positive | 3152599 - 3155190 | 96515.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
